Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891344.1_cds_XP_016446127.1_41015
CDS Infomation

[gene=LOC107771301] [db_xref=GeneID:107771301] [protein=AAA-ATPase At3g50940-like] [protein_id=XP_016446127.1] [location=complement(join(77070..77525,77613..78620))] [gbkey=CDS]
Sequence

ATGTCTTCTACTGCAGAATCGAAAATGGTACTGACCAAGACCGTTTTATCCACAGTAGGC
TCTGTTGCTGCAACAGCTATGGTGGTTCGAACAGTAGTCAATGAATTCCTTCCCTCAGAA
TTGCATGAATATTTCTTCTTTGGCCTCAAAAACATCTTCAGCAGGTTCTCAAATCAGCTA
ACAATGGTAATAGATGAATTTGATGGCTTGGTCAACAATGACATCTATGAAGCAGCTGAA
ATGTACTTGGGAAACAAGCTGTCACCCAACACCCGTCGAGTCAAAATCAGCAAGCCTGAG
AAGGAGAAACATATCAACATAACCATGGAACGCGATGAGGAGGTGACAGATGTTTATAGT
GGGCAGAAATTCAAGTGGGTTTGGCTATGCAGACGAGTAGAGTCTAGAGACTTTTATAAT
CCCAGAGACCTGAATTCCACTCAAAGATCTGAGGTGAGAACCTTTGAGCTCACGTTTCAC
AAGAAAAACAAGGACCTTGTTCTTAATTCTTACTTGCCTTATATTATGAGAGAAGCAAAG
CTGCAGAAACTTAAGAGCAGGGCAATCAAGATTCACACAGTGGATCATGAAAATATGTAT
GACTCGCAGTCGATGAATCTTGATCATCCGGCAACCTTTGAGACTCTAGCAATGGACTCA
GAACTGAAAGACAAAATTTTGAAGGATTTAGACAGATTTGTGAAGAGAAAAGATTATTAT
AGGAAAGTGGGGAAGGCGTGGAAAAGAGGGTACTTGCTGTATGGCCCTCCAGGGACTGGA
AAATCCAGTTTGATCGCCGCCATGGCTAATTATTTGAACTTTGATATATATGATCTGGAG
TTGACTGAGCTGATGAGGAACTCTGATTTAAGGCGGTTGCTTGTGGCCACGGCTAACAAG
TCCATCTTGGTGGTGGAGGACATTGACTGTACCATTGATTTGCAAAATAATTTGGCTAAT
CGAGCAAATGATTCTCCTTCAAACGGTGCTAATCAGCAAGAAAGCAAGGTGACATTATCT
GGTTTGTTGAATTTTATTGATGGATTATGGTCGAGCTGTGGTGATGAAAGAATCATAATT
TTCACAACAAATCACATAGAAAAGTTGGATCCAGCATTGTTAAGGCCTGGTAGAATGGAC
ATGCACATTCATATGTCATATTGCACCCCCTGTGGCTTCAGGCTTCTTGCTGCTAATTAC
CTGGGAACTAAAGAGCACATATTGTTCAAACAAATTGAGGAACTGATAGAAACTGCGATG
GTGACACCGGCCGAAGTGGCGGAGCAACTATTGAAGGAAGATGAGATTGAGATTTCACTT
AATGGTTTAATTAACTTTCTTCACGTAAAGATTAAAGAAAAGGAAGATGCCAAGTTTAAG
AAAGTAGAGGCAGCACAAGTTGAGACGAATGAGAAGAAGGAAAGTGATGAAAAAGAAACT
GAAGAAAACTTTGAAGAAAAATGA

Peptide Sequence

PEP ID

XP_016446127.1
PEP Infomation

PREDICTED: AAA-ATPase At3g50940-like [Nicotiana tabacum]
Sequence

MSSTAESKMVLTKTVLSTVGSVAATAMVVRTVVNEFLPSELHEYFFFGLKNIFSRFSNQL
TMVIDEFDGLVNNDIYEAAEMYLGNKLSPNTRRVKISKPEKEKHINITMERDEEVTDVYS
GQKFKWVWLCRRVESRDFYNPRDLNSTQRSEVRTFELTFHKKNKDLVLNSYLPYIMREAK
LQKLKSRAIKIHTVDHENMYDSQSMNLDHPATFETLAMDSELKDKILKDLDRFVKRKDYY
RKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLNFDIYDLELTELMRNSDLRRLLVATANK
SILVVEDIDCTIDLQNNLANRANDSPSNGANQQESKVTLSGLLNFIDGLWSSCGDERIII
FTTNHIEKLDPALLRPGRMDMHIHMSYCTPCGFRLLAANYLGTKEHILFKQIEELIETAM
VTPAEVAEQLLKEDEIEISLNGLINFLHVKIKEKEDAKFKKVEAAQVETNEKKESDEKET
EENFEEK

Transcript Sequence

Gene sequence data has not been registered.